Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAMNEQDEMLVMSGKEHREVLKRMLSYTKYHIPSLIWTGVLVLLVTLADVFAPILIKIFLDDYLTPMNLEMQALLILGAGYLGLTIGKSVVWYFQLLFFQKIALEIVQQMRIDIFTKLHSLGMRYFDKTPAGSIVSRVTNDTEAVKDMFINVLSTAIQSLFMLVGIYAAMFALNVQLALYSLLLFPLIVFIIFVYRKYSSQFYRARREKLSQLNAKIAESISGMSIVQQFNQERRLVKEFEKINKDYYDVGMKNIKFNALLLGPAIDLIYALAVVIILSFFGAESLIGPVAIGTIYAFISYFDRFLEAIYNVMERLAMYQEAITAASRVFRIMDETEEVPAQLNDPEAKITRAKIEFKDVSFAYEGGRDV-LKNISFTAEPGQTVALVGHTGSGKSSIINLMMRFYEFERGDILIDGKSIKSHEITELRKKTGLVLQDSFMFYGDINTNIRLYDKSITDEQIVDAAKFVQADGFIQTLSDEYNHKVIERGASFSSGQRQLISFARTVVTNPQILVLDEATANIDTETESLIQTGLKRMREGRTTIAIAHRLSTIKDADLILVLSKGRIIERGTHDSLIAE-EGVYHSMYQLQNSGMDLDEAL |
| 2FGK Chain:A ((8-246)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155348 for 1861 contacts (-83.5/contact) +
2D Compatibility (PS) -24754 + (NN) -1715 + (LL) 34748
1D Compatibility (HY) -24400 + (ID) 5050
Total energy: -176519.0 ( -94.85 by residue)
QMean score : 0.476
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