Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLRGILPFAHDTLRKVVRSGDYVVDATCGNGHDTLLLAELVGINGHVLGFDIQQLAIDATNTR-LENAGVSSQVELVCASHARIPEYTSKPVRAAIFNLGYLPGGDKEITTTADSTLESIGHLMELLEVGGVIILVIYHGHPAGKQEKDAVMTFCEAIPQQDFHVLSYNFINQKNDAPFVIIIEKRKPRQS
3EEY Chain:A ((7-190))
----NSLGQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL-NLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPILVCIEKISE---
General information:
TITO was launched using:
RESULT:
Template:
3EEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162382 for 1476 contacts (-110.0/contact) +
2D Compatibility (PS) -20537 + (NN) -13155 + (LL) 740
1D Compatibility (HY) -16400 + (ID) 4000
Total energy: -215734.0 ( -146.16 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3EEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EEY-query.scw
PDB file :
Tito_Scwrl_3EEY.pdb
: