Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSNATLKEAVDVLKKTGVRITPQRHAILEFLINSHTHPTADDIYRALEGNFPNMSVATVYNNLRVFRDAGLIKELSYGDASSRFDFST-SNHYHAICNVCGKIVDFHYPGLDEVEHFAAHMTGYEIDNHRLEVYGICPACKEKQSNN
1MZB Chain:A ((3-136))
--------MVENSELRKAGLKVTLPRVKILQMLDSAQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLYVRKKK--------
General information:
TITO was launched using:
RESULT:
Template:
1MZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71166 for 862 contacts (-82.6/contact) +
2D Compatibility (PS) -14226 + (NN) -4595 + (LL) 1028
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -97459.0 ( -113.06 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_1MZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZB-query.scw
PDB file :
Tito_Scwrl_1MZB.pdb
: