Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIMLVCSAGMSTSLLVKKMTEAIEKQQVDATVIAVA--EADFDKYKGNVD-----VVLLA----PQVRFLEKNLKRVLDPLG-----IPVAIING-----------IDY----------GTMDGEKVLNDALAMIEK-----
4C6S Chain:A ((5-146))
EEFVCISCVEEVRYS-FVSHLSEALRRKGINNVVVDVDIDDLLFKESQAKIEKAGVSVMVLPGNCDPSEVWLDK-FAKVLECQRNNKDQAVVSVLYGDSLLRDQWLSELDFRGLSRIHQSRKECSDSILVEEIVRDVYETHFYV
General information:
TITO was launched using:
RESULT:
Template:
4C6S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86194 for 650 contacts (-132.6/contact) +
2D Compatibility (PS) -10948 + (NN) -2586 + (LL) 96
1D Compatibility (HY) -10800 + (ID) 900
Total energy: -111332.0 ( -171.28 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_4C6S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C6S-query.scw
PDB file :
Tito_Scwrl_4C6S.pdb
: