Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVKIRLKRIGSKKKPFYRIVVADSRFPRDGRSIETIGTYNPLLDPVEVKIDEEATLKWMHNGAKPSDTVRNLLSREGIMEKFHNQKLGK
3BN0 Chain:A ((2-81))
-AVRIRLAKFGRKHHPIYRIVVMDAK------YIDILGTYDP-KRKVLINVYPEKVKEWVLKGVELSHRAKAILWNHGILKE--------
General information:
TITO was launched using:
RESULT:
Template:
3BN0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16388 for 504 contacts (-32.5/contact) +
2D Compatibility (PS) -7726 + (NN) -2841 + (LL) 676
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -34829.0 ( -69.11 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_3BN0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BN0-query.scw
PDB file :
Tito_Scwrl_3BN0.pdb
: