Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------VKITINQASEFVGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVG----DDIFATAKALTQETSLYVTGTINEDTR---SPFGYEMAVSSVEVIS-------------ESHDYPITPKEHGTEFLMDHRHLWLRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFE-EDAFLSQSGQLYMEAAAMA-FGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYK-LEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIERLHELGFDDIV-----WGDDFGAPHETAIADSFEK-----PVFITHYPKAIKPFYMPEDPENDQVVLCADMIAPEGYGEIIGGSERIHDLETLQARMEDFDLDQE-----AYSWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRLLNRLYP |
| 1B8A Chain:A ((1-438)) | MYRTHYSSEIT-----E-ELNG--QKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPK---KKVDPELFK-LIPKLRSEDVVAVEGVVNFTP-KAK--LGFEILPEKIVVLNRAETPLPLDPTGK---------VKAELDTRLNNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTELFPMKYF-EEDAFLAESPQLYKEIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILN--FELEEPKL-PFPRVSYDKALEILGDL------GKEIPWGEDIDTEGERLLGKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKPEICRAFDLEY--RGVEISSGGQREHRHDILVEQIKEK-----GLNPESFEFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIREVILFPRDRRRLTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175814 for 2993 contacts (-58.7/contact) +
2D Compatibility (PS) -41499 + (NN) -7161 + (LL) 2172
1D Compatibility (HY) -23600 + (ID) 6550
Total energy: -252452.0 ( -84.35 by residue)
QMean score : 0.421
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