Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDTSRKIIHIDMDAFYASVEQRDHPEFRGKPLII---GGDPNKRGVVATCSYEARKFGVHSAMPTRQAAKLCPNGIFIHGNMAHYVEVSNQIREIFSRYTDIIEPLSLDEAYLDVTENKKGMKSATMVAREIQQTIYQELGLTASAGVSFNKFIAKIASDFKKPAGITVVTPEEAEAFLEQIPVTKFYGVGKVTAEKLHRLGIETGADLKKWSEWDLIREL--HKHGYHLYRHVRGRSNNIVNPHRDRKSVGKETTFEFNVLDSRVLEQSLMQFAKKVEERLIKLQKHGKTVVLKLRYSDFTTITKRLTLNEYTNDASQIYQAAALLLIESYTGQDSIRLIGLTVTNLKPVYFENLRLEGL |
2W9C Chain:B ((9-285)) | ------VLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSI-EFDKLKGMIGEAKAKYLISLARDEYNEPIR-TRVRKSIGRIVTMKRN---SRNLEEIKPYLFRAIEESYYKLDKR------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121045 for 2043 contacts (-59.2/contact) +
2D Compatibility (PS) -29749 + (NN) -14123 + (LL) 6232
1D Compatibility (HY) -20800 + (ID) 4800
Total energy: -184285.0 ( -90.20 by residue)
QMean score : 0.465
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