Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSIEIKSPEEFQAHINGEELVYVDYWKDNCPNCKMLDLSFAEFKNSEIASKVKVLKVKLEEMGENFFFDRDVQQTPTLVLYKGGEEIHRLNGFIPPNKIEEAVSLNA
2J23 Chain:A ((3-104))
---QVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ-SQIAQEVGIRAMPTFVFFKNGQKIDTVVGA-DPSKLQAAITQH-
General information:
TITO was launched using:
RESULT:
Template:
2J23.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54778 for 747 contacts (-73.3/contact) +
2D Compatibility (PS) -11021 + (NN) -3539 + (LL) 408
1D Compatibility (HY) -8000 + (ID) 1350
Total energy: -78280.0 ( -104.79 by residue)
QMean score : 0.687
(partial model without unconserved sides chains):
PDB file :
Tito_2J23.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J23-query.scw
PDB file :
Tito_Scwrl_2J23.pdb
: