Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTKTLQDRMILPGNGTIPYIGLGVFQVTEQEFIAGAVEKAIEVGYRLFDTAAVYNNEAIVGQAIASS----AVSREELFISSKVWNGDLGYDETLFAFERTLRNLKLDYLDLYLIHWP------------------VAGK--YRDSWRAMERLHDEKLIKSIGVANFKQHHLSDLL--VAANEKPVLNQVETHPLLPQNDLRKYLVEQNIAHAAWSPLAKG----------ILMQNPVITEIAKKHQASVDQVILQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDASDMEKIDRLETGKRVGPDPDDLEYFLSSIERERAYLASENEE |
4JIH Chain:A ((9-291)) | ----------LSTKAKMPIVGLGTWKSPLGK-VKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATI------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138278 for 2073 contacts (-66.7/contact) +
2D Compatibility (PS) -25939 + (NN) -5785 + (LL) 3064
1D Compatibility (HY) -24000 + (ID) 5550
Total energy: -196488.0 ( -94.78 by residue)
QMean score : 0.469
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