Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDLINIQKKLLPDVLMIMQKRYQILRSIYFSEPVGRRTLAGMLGMSERVLRGEVEFLKAQGLVEIASSGMTVTKEGLVVFRDLESVMNQLSGLHSMEEQLAKKLQIKKCLVVQGDSDDTPWVREEMGRVAVEQLDMALTEKRNIVAVMGGSTMATVAEMMTTDFAKGRELLFVPGRGGIGEDLDNQ--ANTICDKMATKTNTKHRVLYVPEQLG-EEAYRSLLKEPAIQEGLRLVQSANAIILGIG---DALAMAKRRHTGEDVLEKIIHRKAVGEAFGYYFDEQGEVVH---KVPTFGLQFEDLAQIPHIIAVAGGTSKAKAIKSYMKSAPKNTILITDEGAAKSLLKGSNTLLK
2W48 Chain:A ((4-315))----------------SDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTI-------------------AINYDYNENLWLEQQLKQKFGLKEAVVA----SSEEEQLSAMGQHGALLVDRLLEPG-DIIGFSWGRAVRSLVENLPQR-SQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYIN-CLVTNRETAELLLK-------


General information:
TITO was launched using:
RESULT:

Template: 2W48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160770 for 2416 contacts (-66.5/contact) +
2D Compatibility (PS) -32370 + (NN) -13571 + (LL) 3088
1D Compatibility (HY) -11600 + (ID) 2850
Total energy: -218073.0 ( -90.26 by residue)
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_2W48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W48-query.scw
PDB file : Tito_Scwrl_2W48.pdb: