Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGRKAKSFMDNGDLVPDEVTNGIVRERLSEDDAKDGFLLDGFPRTVEQAQELENILSDLGTELDAVINIDVEKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQRDDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHN-----INGEQEIKDVFVDVEKILASF
1AKE Chain:B ((1-213))MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQA----DAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKIL---


General information:
TITO was launched using:
RESULT:

Template: 1AKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48508 for 1619 contacts (-30.0/contact) +
2D Compatibility (PS) -22626 + (NN) -13365 + (LL) 752
1D Compatibility (HY) -16400 + (ID) 4950
Total energy: -105097.0 ( -64.91 by residue)
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_1AKE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AKE-query.scw
PDB file : Tito_Scwrl_1AKE.pdb: