Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKAVVKTNPGY-DQMELKDVEEPQVYGDKVKIKVAFTGICGSDIHTFKGEYK-NPTTPVTLGHEFSGVVVEVGPDVTSIKVGDRVTSETTFETCGECIYCKEHDYNLCSNRRGIGTQANGSFAEFVLSREESCHVLDERISLEAAA-LTEPLACCVHSALEKTTIRPDDTVLVFGP-GPIGLLLAQVVKAQGATVIMAGITKDSDRLRLAKELGMDRIVDTLKEDLAEVVLGMTGGYGAERVFDCSGAVPAVNQGLPLTKKKGDFVQVGLFAEKKNAIDEESIIQREIAYIGSRSQKPSSWILALDLLANGKIDTDKMITKVYGLDDWREAFEAVMAGN-EIKVLVKS |
2EIH Chain:A ((1-341)) | MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPG-LSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIA--TAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGAL-YFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKL--KPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157223 for 3057 contacts (-51.4/contact) +
2D Compatibility (PS) -36580 + (NN) -18938 + (LL) -88
1D Compatibility (HY) -14800 + (ID) 4500
Total energy: -232129.0 ( -75.93 by residue)
QMean score : 0.460
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