Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VEIKQIKAKDTQDIRHRVLRPEQ--------PEEN-----AIYPNDDMEGTFHLGAFEKDVLLGVASFYPEKSTVIMNPAQYRIRGVATERRMRLKGLGTALLAEGEAEIWTRGADIIWCNA---RIVAVGFYEKHGYRKVGKSFVIPGI--GEHYLMKKVNPNKKVDQDN
2FIA Chain:A ((1-157))
MKIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDI-TKKRLYLLVHEEMIFSMATFCMEQE-----QDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESLQMNRLDFGSFYLYVKELE--------
General information:
TITO was launched using:
RESULT:
Template:
2FIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28241 for 951 contacts (-29.7/contact) +
2D Compatibility (PS) -14621 + (NN) -115 + (LL) 912
1D Compatibility (HY) -8800 + (ID) 1250
Total energy: -52115.0 ( -54.80 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_2FIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FIA-query.scw
PDB file :
Tito_Scwrl_2FIA.pdb
: