Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKIRNLTKKM--DDNLVLKDVSFDLKAGEITALIGRNGVGKTTLFSTMTGIYLPDEGDVFLDEESI--FKHPEVKQQLFFLEDNMNHFNTYSVQTVVKI-------YRQIYTTFDEAFFNELMQQ----FELPMKAKLMSFSKGRKALFFIILAFSLNVRFLLLDEPLDGLDIIIKKQILATIKDTVKKRGTSVVIASHRLEELEAIADRVIVLKGASVELDYYLEDMRTDAVKIQVAFKTKKIPGFVKNNAQLLYRNGRIYTLLVTENASSFLAELRLEEPVLLEEMSISIEDIFTVHLANDKIDYYEI |
| 3B60 Chain:A ((10-581)) | WQTFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFND-TVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNR-TSLVIA-HRLSTIEQ-ADEIVVVEDGIIVERG--------------------------THSELLAQHGVYAQLHKMQFG---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177232 for 1795 contacts (-98.7/contact) +
2D Compatibility (PS) -24004 + (NN) -3256 + (LL) 6224
1D Compatibility (HY) -11200 + (ID) 2950
Total energy: -212418.0 ( -118.34 by residue)
QMean score : 0.475
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