Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIMLMCNAGMSTSV-LVRKMERVVEERNLELTIWAISETDFEKNWRKADAILLGPQVNYMKDKVID-TVGDNVSVAVIDIVDYGRMNGEKVLDLA-ISLL---
2R4Q Chain:A ((170-273))
-AKILAVTACPTGHTFMAADALKEKAKELGVEIKVETNGSSGIKHKL-TAQEIEDAPAIIVAADKQVEMERFKGKRVLQVP-VTAGIRRPQELIEKAMNQDAPIY
General information:
TITO was launched using:
RESULT:
Template:
2R4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44196 for 750 contacts (-58.9/contact) +
2D Compatibility (PS) -10070 + (NN) -1254 + (LL) 512
1D Compatibility (HY) 2000 + (ID) 550
Total energy: -53558.0 ( -71.41 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_2R4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R4Q-query.scw
PDB file :
Tito_Scwrl_2R4Q.pdb
: