Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEFDTIAAISTPPGEGAIAIIRLSGPEAIQIADRIFYAKNSLSEAESHTIHYGHIKEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDALAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLRTASQGKILREGLATAIIGRPNVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAGIRETEDIVEKIGVERSRKALADADFILLVLN-----QNEELTVEDEALF--EAAAGHNYVVVLNKTDLETKLDIDRVRELAGENP-----------IVSTSLVNDEGLEALEEAIKTLFFAGDIDAGDATYVSNVRHIALLHQALEALNGVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLFNQFCLGK |
| 1M2O Chain:B ((24-190)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKLLFLGLDNAGKTTLLHMLKNDRLATLQP----TWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDY--------FPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLNTTGIEGQRPVEVFMCSVVMRNGYLEAFQWLSQYI-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75554 for 1100 contacts (-68.7/contact) +
2D Compatibility (PS) -16193 + (NN) -5732 + (LL) 24368
1D Compatibility (HY) -8400 + (ID) 1400
Total energy: -82911.0 ( -75.37 by residue)
QMean score : 0.472
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