Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGK------NPL-LVGVLKGSVPFMAELLKHI---DTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
1P19 Chain:B ((9-192))
------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVS------------RMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVYAE
General information:
TITO was launched using:
RESULT:
Template:
1P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116933 for 1252 contacts (-93.4/contact) +
2D Compatibility (PS) -17629 + (NN) -3937 + (LL) 472
1D Compatibility (HY) -20000 + (ID) 3650
Total energy: -161677.0 ( -129.13 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_1P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P19-query.scw
PDB file :
Tito_Scwrl_1P19.pdb
: