Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVSQTYGLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDNGLSYIDDYKEVLAFQETNS--DLFKLSYASYITSLADVA----ISDNVADAQLFIFLKKTLELIEDGLDYEILTNIFEVQLLERFGVAL-----NFHDCVFCHRV--GLPFDFSHKYSGLLCPNHYYKDERRNHLDPNMLYLINRFQSI--------QFDDLQTISVKPEMKLKIRQFLDMIYDEYVGIHLKSKKFID----DLSSWGSIMKSD---------------- |
| 2LGZ Chain:A ((1-273)) | ----------MGSSHHHHHHSSGLVPRGSHSTWVTRTAYSSPSVVLPSQTP-----------DGKLALIDDFREAYYWLRMNSDEDSKVAAWWDYGYQIGGMADRTTLVDNNTWNNTHIAIVGKANASPEEKSYEILKEHDVDYVLVIFGGLIGFGGDDINKFLWNIRISEGIWPEEIKERDFYTAEGEYRVDARASETMRNSLLYKMSYKDFPQLFNGGQATDRVRQQMITPLDVPPLDYFDEVFTSENWNVRIYQLKKDDAQGRTLRDVGELTRSSTKTRRSIKRPELGLRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9405 for 1842 contacts (-5.1/contact) +
2D Compatibility (PS) -23865 + (NN) -2700 + (LL) 2252
1D Compatibility (HY) -800 + (ID) 2000
Total energy: -36518.0 ( -19.83 by residue)
QMean score : 0.145
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