Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKWLVKASSLVVLGGMVLSAGSRVLADTYVRPIDNGRITTGFNG--------YPGHCGVDYAVPTGTIIRAVADGTVKFAGAGANFSWMTDLAGNCVMIQHADGMHSGYAHMSRVVARTGEKVKQGDIIGYVGATGMATGPHLHFEFLPANPNFQNGFHGRINPTSLIANVATFSGKTQASAPSIKPLQSAPVQNQSSKLKVYRVDELQKVNGVWLVKNNTLTPTGFDWNDNGIPASEIDEVDANGNLTADQVLQKGGYFIFNPKTLKTVEKPIQGTAGLTWAKTRFANGSSVWLRVDNSQELLYK |
| 3SLU Chain:A ((218-343)) | ----------------------------FNIEPLVYTRISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKG------R-KGGYGNAVMIRHANGVETLYAHLSAFSQA-QGNVRGGEVIGFVGSTGRSTGPHLHYEAR------INGQ--PVNPVSVALPTPELTQADKAAFAAQKQKADALLARLR------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81609 for 920 contacts (-88.7/contact) +
2D Compatibility (PS) -11952 + (NN) 903 + (LL) 7696
1D Compatibility (HY) -4800 + (ID) 2550
Total energy: -92312.0 ( -100.34 by residue)
QMean score : 0.411
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