Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITQRQNDILNLIVELFTQTHEPVGSKALQRTIESSSATIRNDMAKLEKLGLLEK--AHTSSGRMPSPAGFKY-FVEHSLRLDSIDEQDIYHVIKA--FDFEAFKLEDMLQKASHILSEMTGYTSVILDVEPARQRLTGFDVVQLSNHDALAVMTLDESKPVTVQFAIPRNFLTRDLIAFKAIVEERLLDGSVMDIHYKLRTEIPQIVQKYFVTTDNVLQLFDYVFSELFLETVFVAGKVNSLTYSDLSTYQFLDNEQQVAIS-LRQGLKEGEMASVQVADSQEAALADVSVLTHKFLIPYRGFGLLSLIGPIDMDYRRSVSLVNIIGKVLAAKLGDYYRYLNSNHYEVH |
| 3BM3 Chain:A ((2-260)) | --------VRNLVIDI---------TKKPTQNIPPTNEIIEEAITELNVDELLDRLFEKDESGEVITPSRIAKMLEEKAFEIYKEYEKQVREAYLSAGYSREKLEQSFQQARFSRGGKAFEIIFTKLLNKFGIR-----------YEHDRVIKIYDYITEGEKPAFIIPSVRTFLNDPSSAILITVK---RKVRERWREAVGEAQILRNKFGDE----INFWFVGFDEEF--------------------------TIYSAIAMLDNGID-----RVYVIDGRYDSLIEEIK---RISDP----------NFNEDKYIQKIRRFSDIFDDIIQFLNKH------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75690 for 1917 contacts (-39.5/contact) +
2D Compatibility (PS) -26242 + (NN) -1065 + (LL) 6248
1D Compatibility (HY) -2400 + (ID) 2000
Total energy: -101149.0 ( -52.76 by residue)
QMean score : 0.347
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