Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITLEKFIDHLNVEEVLFTFFTKLISILLLIIAFVIVRQVINYLFEKTVNRSLAFSRQKVARQKTLAKLSHNVLNYTLYFFLFYWILSILGVPISSLLAGAGIAGVAIGLGAQGFLSDVVNGFFILLENQFDVGDIINVGTVSGTVTNVGIRTTQIHDFDGTLHFIPNRNI---TIVSNKSRSNMRAQIDIPLFVHTNLDQISDIVTKINEEYVSKHPAIVGEP-TVFGPTTNANGQFVYRINIFTQNGAQFDIYAEFYKLYQKAILEEGIDLPTYNFSNNHSR-
2VV5 Chain:A ((25-280))----------------LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKI---------DATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQS----EDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV


General information:
TITO was launched using:
RESULT:

Template: 2VV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158115 for 1617 contacts (-97.8/contact) +
2D Compatibility (PS) -26834 + (NN) -10555 + (LL) 3088
1D Compatibility (HY) -21600 + (ID) 2850
Total energy: -216866.0 ( -134.12 by residue)
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_2VV5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VV5-query.scw
PDB file : Tito_Scwrl_2VV5.pdb: