Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKKKSVFTCQECGYQSPKYLGRCPNCSAWSSFVEEVEVQEVKNARVSLNGEKSRPTKLKDVSSINYSRTKTDMDEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLA-----------------NKGTVLYVSGEE--SAEQIKLRSERLGDI----DNEFYLYAETNM-------QSIRSEIEK-IKPDFLIIDSIQTIMSPEVSS---VQGSVSQVREVTAELMQLAKTNNIATFIVGHVTKEGT---LAGPRMLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGTRPILAEVQALVTPTVFGNAKRTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKEKPTNPQESFIGEIGLTGEIRRVTRIEQRINEASKLGFTKIYAPKNSLAGIEIPKGIDVIGVTTVSQVLKAVFST |
| 2I1Q Chain:A ((76-321)) | -----------------------------------------------------------------TVWKLSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERIMQMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTNQVSAK--AEQAIGGHIVGHAATFRFFVRKGK-GDKRVAKLYDSPHLPD-AEAIFRITEKGIQD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118856 for 1636 contacts (-72.7/contact) +
2D Compatibility (PS) -22625 + (NN) -14055 + (LL) 17060
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -146426.0 ( -89.50 by residue)
QMean score : 0.616
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