Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MDIKAEIQKLAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRIYPERLLESAKTIISIGVAYPHKLPQQPQKTSYKRGKITPNSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEYGSYMFLGELITNLEIEPDKPVDYDCGDCRRCLDACPTSCLIGDG---SMNAKRCLSFQTQDKGMMDIEFRKKIKTVI--------YGCDICQICCPYNKGI--NNPLATE------IDP--ELAQPELIPFLSLS-NGQFKEKFGMIA------GSWRGKNILQRNAIIALANAHDKTAVVKLIEIIDK-NNNPIHTATAIWAL---------------GEIVKKPNDEI--------LEFMSNLTLKDED--SRKELELIRHKWQF--------------------------------------------- |
| 2Q06 Chain:A ((22-496)) | ATEIRASVGRMVGGIGRFYIQMCTELKLSDQEGRLIQNSITIERMVLSAFDERRNRYKDPKKTGGPIYRRRDGKWVRELILYDKEEIRRIWRQANNGE-------DATAGLTHMMIWHSNLNDATYQ----------RTRALVRTG-MDPRMCSLMQGSTLPRRSGAAGAAIKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQKAMMDQVRESRNPGNAEIEDLIFLARSALILRGSIAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMDSSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFKGNTEGRTSDMRTEIIRMMESARPEDVSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAEEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2205 for 2631 contacts (0.8/contact) +
2D Compatibility (PS) -37258 + (NN) -4131 + (LL) 1384
1D Compatibility (HY) -6000 + (ID) 3050
Total energy: -46850.0 ( -17.81 by residue)
QMean score : 0.232
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