Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEIAVLIIAIAFVVLVLGILFVLKKVSETIEETKQTIKVLTSDVNVTLYQTNEILAKANVLVDDVNGKVSTIDPLFVAIADLSESVSDLNLQARHIGQKASSATSSVTKAGSALAIGKAASKIFRKKGDKK |
1VFI Chain:A ((1-95)) | -----------------------------ISEFAPVDCKGQCTTPCEPLTACKEKCAESC---ETSADKKTCRRNCKKADCEPQDKVCDACRMKCHKACRAANCASECPKHEHKSDTCRACMKTNCK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 13741 for 596 contacts (23.1/contact) +
2D Compatibility (PS) -9736 + (NN) 2229 + (LL) 4800
1D Compatibility (HY) 6000 + (ID) 800
Total energy: 16234.0 ( 27.24 by residue)
QMean score : 0.105
|
|
|