Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTKKEFILGLTIIITLTLLIMLIFLVMFNKSSNSKLKQTKDRRVLSTSTTRTSSSSHDQKIVEKSLEKKKMVMEQDMELMNAYRLYYDYAHLSLKEVVLAYMSEYGIEKNSVAFSYKNLKTGQRDAMNDTQAMTAGSTYKLPLNMLVVDAVVKGKLSMEERFDITETDY-EYIGEHNNYVAAFSGAMSIDDMQKYSLVYSENTPAYALAERIGGMDSAYSKFGRYGQSKGDIKNIQ---------KNGNKVTTDYYIQVLDYLWKHR----KKYDSLITYLEEAF-PTDYYRALIPSDVVVAQKPGYV-REALNVGAIVK-E-EVPYIVAIYTAGLGGSTQEDSEINGVGLYQLEQLCFVINQWHRVNMN |
| 1G6A Chain:A ((6-265)) | ---------------------------------------------------------------------------------------------QQVEQDVKAIEVSL---SARIGVSVLDTQNGEYWDYNGNQRFPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQ---VGQAITLDDACFATMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKAIASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADKSGAGGFGARSITAVVWSEHQAPIIVSIYLAQTQASMEERNDA----IVKIGHSIFDVYTS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G6A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110153 for 2074 contacts (-53.1/contact) +
2D Compatibility (PS) -25569 + (NN) -398 + (LL) 9460
1D Compatibility (HY) -6400 + (ID) 2300
Total energy: -135360.0 ( -65.27 by residue)
QMean score : 0.402
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