Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------MYLKSLSIKN------YRKYGEEVQTINFAHSKWSEMSGAEDESEKINRTEEYISKSSSLIVGKNNSGKSTIVKLLNTLQNTKSGSRNIFKYTDFNLKMLSDWYRFNIDNKSKEDIESIDKSDFPKLEFQLILGIDDENDLISSF-EDILILGGIETVGTHENQEVAEVTIDVKYEVADVQSFLEELVKIKSSPREKI---EQYDQGYQKELRYRKFLSLFSSNYFVLNFYPIRRDEPAKEFSLSSLLKVATI-EANTVKNDKTLSQAYNKIVSTYIKNNDIVEIDSLVGDINYQVKDMVDTNIKDILQSAVSSIESTKNLKMNLHPDVTLEKIFANSIIYEYQEGNNNIPE-SQFGMGYTNLMVI-IAKIVDYIELYSEKDINGS------VNILCIE--EPESFMHPQMQELFIKNISKAIATLLGKKQQLDTFQII-------ITTHSTHILNSKIQSGNTLNNISYLGQVGVNNIIKNVSDDKIASGRDIDKKAYE--------YIKKYLRLEITDI----------FFADAVVLVEGVSEETYLRYEIDRHSILKNHHVKVYRIDGAYAHQFISLLDLLGVRTVIFTDLDLKRSESEK-KVDIKDN--AEPDVIPSNIPDLEEKYGGVASSLTTNGTIQYFVKK----LLNDDKAKYDK---------INSKIIEILTDKEELVVEYNNISMYSQGKINKY-YATSFEEAIVLTNAGNEDENKYKKSLIKALQYVHPNMRYFGDIDETSEIADKSYMYQVKLSDGKSKFSTGIVYLSITDKEFSLKRPQYVESGLNLLCG--YFEE---- |
| 4BSM Chain:A ((3-1017)) | AIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAWTRVDTQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTS-----ESLCQNNMVILKLLSEEVITQVKSKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVS-QYEEQFVTLFTLTMMQLKQMLPLNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHDQLIEKRLNLRETLMEALHYMLLVSEVEETEIFKICLEYWNHLAAELYRESPFSTSASPHFDVP-PRRQLYLPMLFKVRLLMVS--------RMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTERIMTEKLHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVWDSILKTNVRACKAVGHPFVIQLGRIYLDMLNVYKCLSENISAAIQANMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAAEVLSTMAIIVNKLHITAEIPQIFDAVFECTLNMINKDEYPEHRTNFFLLLQAVNSHCFPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTNLVEEGKLQEYVANPAFKEHLRD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 25767 for 5079 contacts (5.1/contact) +
2D Compatibility (PS) -75157 + (NN) -3575 + (LL) 1264
1D Compatibility (HY) -30800 + (ID) 5600
Total energy: -88101.0 ( -17.35 by residue)
QMean score : 0.162
|
|
|