Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLNLLMKPKTSSKQKKEKTKKREVLPTTLNTLAYQGLFPNGLMQVSPDYFSQSYLLGDVNYQTVGLEEKEAIVEKYSNLINSLDDKTNFQLTIFNKKVNLEQFRKSVLYPLQEDGFDSYREELNRMMDSNLEAGENNFSAVKLISFGKSDQAPKLAYRSLSQIGE----YFKSGLSEIEASFTLLTGEERVNNLADMLRGENHLPFTYKDLVLSGQTTKHFIAPTSISFKHKNHIEIDNRLLQIVYVRDYGMELGDKFIRELMQSDLEVVISLHAKGSTKSEAMKKLRTKKTLMESQKIGEQQKMARSGIYLDKVGHALESNIDEAEDLLKTMTQTGDKLFDTVFLIGFFADNEEQLKQSLDIIKQVAGSNDLIIDNLTYMQEAALNSLLPFGKNCLEGVSRSLLTSNIAVNSPWTSVDLQDAG----GKFYGINQISSNIITIDRGKLNTPSGLILGTSGSGKGMAT-KHEIISTKLKEADKDTEIIIVDP------ENEYSV----SGQAFGGEIIDIAPDSRTFLNVLDLSDDNLDEDPVKVKSEFLLSWIGKL-LDRKMDGREKSIIDRVTRLTYKHFEEPSLVEWVFVLSQQPEQEARDLALDMELYVEGSLDIFSHKTTIQTDSHFLIYNVKKLGDELKQIALMVIFDQIWNRVVKNQKLGKKTWIYFDEMQ-LLLLDQFASDFFFKLWSRVRKYGATPTGITQNVETLLLDANGRRIIANSEFMILLKQA---KSDREELVHMLGLSKELEKYLVNPEKGAGLIKAGSTVVPFRNKIPHQTKLFDIMSTDPDKMRT------- |
| 4UIR Chain:A ((2-646)) | --------NPITSKFDKVLNA--------------------------SSEY-------GHVNHEPDSSKEQQRNTPQKSMPFS--DQIGNYQR---NKGIPVQSYDNSKIYIIG-SGIAGMSAAYYFIRDGHVPAKNITFLEQLHIDGG-----------SLDGAGNPTDGYIIRGGREMDMTY---------ENLWDMFQDIPALEMP---------------APYSVLDEYRLINDNDSNYSKARLINNKG-EIKDFSKFGLNKMDQLAIIRLLLKN---KEELDDLTIEDYFSESFLKSNFWTFWRTMFAFENW-----HSLLELKLYMHRFLHAIDGLNDLSSLV-FPKYN--QYDTFVTPLRKFLQEKGVNIHLNTLVKDLDIHINTE--GKVVEGIITEQDGKEVKIPVGKNDYVIVTTGSMTEDTFYGNNK-TAPIIGIDNSTSGQSAGWKLWKNLAAKSEIFGKPEKFCSNIEKSAWESATLTCKPSALIDKLKEYSVNDPYSGKTVTGGIITI-TDSNWLMSFTCNRQPHFPEQPDDV----LVLWVYALFMDKEGNYIKKTMLECT--------GDEILAELCYHLG-----------------IEDQLENVQKNTIVRT--AFMPY-------------ITSMF--------MPRAKGDRPRVVPEGCKNLGLVGQFVE---------------TNNDVVFTMESSVRTAR----IAVYKLLNLNKQVPDINPLQYDIRHLLKAAKTLNDD--KPFVGEGLLRKVLKGTYFEHVLPAGEEHESFIAEHVNKFREWVKGIRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 66598 for 5114 contacts (13.0/contact) +
2D Compatibility (PS) -62220 + (NN) 842 + (LL) 13456
1D Compatibility (HY) -24800 + (ID) 6700
Total energy: -12824.0 ( -2.51 by residue)
QMean score : ?
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