Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAENQVTIKEERVLEWLSKGAQPSDTVRNLLSKAGVMTKFHDQKFSK
3BN0 Chain:A ((2-79))
-AVRIRLAKFGRKHHPIYRIVVMDAK------YIDILGTYDPK-RKVLINVYPEKVKEWVLKGVELSHRAKAILWNHGILKEVVPEGYEM
General information:
TITO was launched using:
RESULT:
Template:
3BN0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34956 for 490 contacts (-71.3/contact) +
2D Compatibility (PS) -7413 + (NN) -1292 + (LL) 356
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -51855.0 ( -105.83 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_3BN0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BN0-query.scw
PDB file :
Tito_Scwrl_3BN0.pdb
: