Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDIGIIVVSHSKNIAQGVVDLISEVAKDVSITYVGGTEDG--EIGT------------------SFDQVQQIVEQ-NDKKTLLAFFDL-GSAKMNLELVADFSEK---NIII---N-SVPV-----------VEGA-----YTAAALLQAGADLDSIQSQLAELTINK
2IU4 Chain:A ((44-181))
-----------------------------VPIISGGGSGHEPAHVGYVGSGMLAAAVTGPLFIPPKSKNILKAIRQVNSGKGVFVIIKNFEADLKEFNEAIKEARTEGIDVRYIVSHDDISVNAYNFHKRHRGVAGTILLHKILGA-FAKEGGSIDEIEQLALSLSPEI
General information:
TITO was launched using:
RESULT:
Template:
2IU4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52456 for 587 contacts (-89.4/contact) +
2D Compatibility (PS) -10706 + (NN) -8321 + (LL) 2428
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -72655.0 ( -123.77 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_2IU4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IU4-query.scw
PDB file :
Tito_Scwrl_2IU4.pdb
: