Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLHFENDYNKGAHPELLNALIETNDQGLSGYGTDSYCQQAADKIREVCSCPQAEVEFLVGGTQTNQVVISSMLASYEGVIAAETGHVSSHEAGAIEF---SGHKVLTLPSHNGKLLASEVATYIETFYADGNYQHMVFPGMVYISHPTEYGTLYSKAELEELSKICKHYQIPLFIDGARLGYGLAAKDTDVDFPTIAALSDVFYIG--GTKMGALAGEAVVFTKKNRPKQFTTIVKQHGA------------------------LLAKGRLLGLAFDRFFTDD-------------LYLKIGKHAIDLAEELKIILEEKGYSFYLK-SPTNQQFVIVENTKLTDLAKNVAYSFWEKYDDHHTVIRLATSWS-TSREDVTALRNVL-------- |
| 1JG8 Chain:A ((5-347)) | MIDLRSDTVTKPTEEMRKAMAQA-EVGDDVYGEDPTINELERLAAETFGKE--AALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIEN---THNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNA--SIASGVPVKEYAGYADSVMFCLSK-GLCAP-VGSVVVGD---RDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKV-NAHGFIEALRNSGVLANAVS---------------------------------DTEIRLVTHK-DVSRNDIEEALNIFEKLFRKFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180388 for 2375 contacts (-76.0/contact) +
2D Compatibility (PS) -31486 + (NN) -9359 + (LL) 3384
1D Compatibility (HY) -4800 + (ID) 2900
Total energy: -225549.0 ( -94.97 by residue)
QMean score : 0.439
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