Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MIKSKILLQLMQGKIVAVIRGNSQEEAFQAAQACIKGGISAIEIAYTNSKASQVIEQLVTQYTNQEQVVVGAGTVLDSETARMAILAGAKFIVSPAFNLQTAKLCNRYAIPYLPGCMTLSEVTTALEAGCEIIKIFPGGTL-GTSFISSLKAPLPQVQIMVTGGVNLTNAKDWFLSGVTAIGIGGEF--NKLAALGEFDKITEMAKQYKIQLNLN
1FQ0 Chain:A ((1-213))
MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPE---AIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL-
General information:
TITO was launched using:
RESULT:
Template:
1FQ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183277 for 1777 contacts (-103.1/contact) +
2D Compatibility (PS) -22615 + (NN) -13850 + (LL) 264
1D Compatibility (HY) -7600 + (ID) 2800
Total energy: -229878.0 ( -129.36 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_1FQ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FQ0-query.scw
PDB file :
Tito_Scwrl_1FQ0.pdb
: