Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQSKMLIPTLREMPSDAQVISHALMV-RAGYVRQ--VSAGIYAYLPLANRTIEKFKTIMRQEFEKIGAVEMLAPALLTADLWRE-SGRYETYGEDLYKLKNRD----QSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFI-MKDGYSFHKDYEDLDVTYEDYRKAYEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVTPNRTDLNRWLVLDKTIPSIDDIPEDVLEEIKVELSAWLVSGEDTIAYSTESSYAANLEMATNEYKPSTKAATFEEVTRVETPNCKSIDEVAGFLSIDENQTIKTLLFIADEQPVVALLVGNDQVNDVKLKNYLAADFLEPASEEQAKEIFGAGFGSLGPVNLPDSVKIIADRKVQDLANAVSGANQDGYHFTGVNPERDFTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKD--QESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKKASE-GIVEVKIKASGDTIEVHADNLIETLEILTKK |
| 1NJ8 Chain:A ((5-376)) | --------------------EWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRP--------EW------------------------------------------------DKF------------------------------------PG----------------------------------------------------A-------------------EYT-------------------------------------M--AFD------------TIFPD-------GRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGIS-DRVIASIIAIHGD-------------EKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLK-GKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118618 for 2902 contacts (-40.9/contact) +
2D Compatibility (PS) -38407 + (NN) -5813 + (LL) 17216
1D Compatibility (HY) -22400 + (ID) 4250
Total energy: -172272.0 ( -59.36 by residue)
QMean score : 0.390
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