Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNSNIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVCTATEDYKDVAAVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMTLG-ADYVATGHYAQVTRDENGIVHMLRGADNNKDQTYFLSQLSQEQLQKTLFPLGHLQKPEVRRIAEEAGLATAKKKDSTGICFIGEKNFKDFLGQYLPAQPGRMMTVDGRDMGEHAGLMYYTIGQRGGLGIGGQHGGDNKPWFVVGKDLSKNILYVGQGFYHDSLMSTSLTASEIHFTRDMPNEFKLECTAKFRYRQPDSKVTVYVKGNQARVVFDDLQRAITPGQAVVFYNEQECLGGGMIDQAYRDDKICQYI |
| 2YWB Chain:A ((208-374)) | ----GKDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLL--------RLGEREEVEGALRALGVNLLVVDAKERFLKALKG-----V--EDPEEKRKIIGRE-FVAAFSQVARERGPFRFLAQGTLYPDVIE----------------------GLPEDLEFELLEPFRLLFKDEVRELALLLGLPDTLRLRHPFPGPGLAVRVLGEVTEERLEILRRADDIFTSLLREWGLYEKVAQALAVLTPVGYVLALRAVTTEDFMTADWARLPLEFLDEAARRITRRVPEIGRVVYDLTSKPPATIEWE----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68614 for 1067 contacts (-64.3/contact) +
2D Compatibility (PS) -16452 + (NN) -5610 + (LL) 4348
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -97428.0 ( -91.31 by residue)
QMean score : 0.513
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