Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRKRLDDTTQQIEKFKADKKESKTQKTEQTDIGEGYDNLARLYQEGFHICNVHYGSVRKEDCLFCLSFLNKK
2W83 Chain:C ((1-67))
-------------AMDPEFMGREVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKN---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2W83.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13919 for 264 contacts (52.7/contact) +
2D Compatibility (PS) -7299 + (NN) -3233 + (LL) 3540
1D Compatibility (HY) -2000 + (ID) 450
Total energy: 4477.0 ( 16.96 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2W83.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W83-query.scw
PDB file :
Tito_Scwrl_2W83.pdb
: