Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYADALYDSLGHSVLICDRDVYIAVSGSS--------KKDYLNKSISEMLERTMDQRSSVLESDAKSVQLVNGIDEDMN-----SYTVGPIVANGDPIGAVVIFSKDQTMGEVEHKAVETAAGFLARQMEQ
2B18 Chain:A ((10-164))
------------MALLQKTRIINSMLQAAAGKPVN-----------------------FKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEIL-
General information:
TITO was launched using:
RESULT:
Template:
2B18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47822 for 1044 contacts (-45.8/contact) +
2D Compatibility (PS) -15670 + (NN) -8354 + (LL) 2436
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -74460.0 ( -71.32 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_2B18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B18-query.scw
PDB file :
Tito_Scwrl_2B18.pdb
: