Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGSKLQGKITGITNFGAFVELPGGSTGLVHISEVADNYVKDINDHLKVGDQVEVKVINVEK-DGKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNKFLKDSEDRLSSLKRNTESKRGGRGARRG
3BZC Chain:A ((652-728))
--LKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLSMRMSDT--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49226 for 525 contacts (-93.8/contact) +
2D Compatibility (PS) -7583 + (NN) 1620 + (LL) 1976
1D Compatibility (HY) -8000 + (ID) 1550
Total energy: -62763.0 ( -119.55 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_3BZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BZC-query.scw
PDB file :
Tito_Scwrl_3BZC.pdb
: