Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGEKPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR |
1G39 Chain:C ((1-29)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVSKLSQL--QTELLAALLESGLSKEALIQA-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 819 for 118 contacts (6.9/contact) +
2D Compatibility (PS) -3018 + (NN) -512 + (LL) 16320
1D Compatibility (HY) -2800 + (ID) 400
Total energy: 10409.0 ( 88.21 by residue)
QMean score : 0.635
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