Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREV-RWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
3ILJ Chain:A ((2-135))
---VAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLALDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPEL-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ILJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100170 for 992 contacts (-101.0/contact) +
2D Compatibility (PS) -13722 + (NN) -2800 + (LL) 2088
1D Compatibility (HY) -9600 + (ID) 3150
Total energy: -127354.0 ( -128.38 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_3ILJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ILJ-query.scw
PDB file :
Tito_Scwrl_3ILJ.pdb
: