Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDILLVDGYNMIGAWPQLKDLKANSFEEARDVLIQKMAEYQSYTGNRVIVVFDAHLVKGLEKKQTNHRVEVIFTKENETADERIEKLAQALNNIATQIHVATSDYTEQWAIFGQGALRKSARELLREVETI--ERRIERRVRKITSEKPAGKIALSEEVLKTFEKWRRGDLD
2N3Z Chain:A ((1-99))
-------------------------------------------MGRLVVVVTSEQLKEEVRKKFP--QVEVRLVTTEEDAKQVIKEIQKK--GVQKVVLVGVS----------EKLLQKIKQEANVQVYRVTSNDELEQVVKDVKGSGLEHHHHHH----------------
General information:
TITO was launched using:
RESULT:
Template:
2N3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17320 for 700 contacts (-24.7/contact) +
2D Compatibility (PS) -10944 + (NN) -6013 + (LL) 5616
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -34911.0 ( -49.87 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_2N3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2N3Z-query.scw
PDB file :
Tito_Scwrl_2N3Z.pdb
: