Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNIEEIIASVKEATVLELNDLVKAIEEEFGVTAAAPVAVAGGAAAGGAAEEQSEFDLILAGAGSQKIKVIKVVREITGLGLKEAKELVDNTPKP---LKEGIAKEEAEELKAKLEEVGASVEVK
1DD3 Chain:A ((58-128))
-------------------------------------------------------EFDVVLKSFGQNKIQVIKVVREITGLGLKEAKDLVEKAGSPDAVIKSGVSKEEAEEIKKKLEEAGAEVELK
General information:
TITO was launched using:
RESULT:
Template:
1DD3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34307 for 481 contacts (-71.3/contact) +
2D Compatibility (PS) -7835 + (NN) -6160 + (LL) 5024
1D Compatibility (HY) -7600 + (ID) 2250
Total energy: -53128.0 ( -110.45 by residue)
QMean score : 0.759
(partial model without unconserved sides chains):
PDB file :
Tito_1DD3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DD3-query.scw
PDB file :
Tito_Scwrl_1DD3.pdb
: