Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIAA-GFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVIDVLQHQSGLPS-----SFYFYTPEKAGKYYSQERDKTIEYLTKIPL--DYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPSATDP-------TFALGWRRNGSKSMEWMFGPHASENAYGHTGWTGTVTIIDPAYNLGIALLTN----------------------KKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME----------------------------------------------------------- |
| 2QMI Chain:A ((1-447)) | ----------------------------------------------MDVGKLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRN-------VEARLPSTPETIYGIGSITKSFTA-LAIMKLVEEGGLSLDDPVEKFVNIKLRPFGE------PVTVHHLLTHSSGIPSLGYAEAFIDGMVGGDNWLPVSTPEETIAFARDMEKWAVAKPGERFFYLNTGYVLLGKIIEKVSGVSYEEYIKKKILEPLGMNRSYFFKEEVEKDKDVAMGYILDKE--------------------GRLVPQPFPYGITADGGLLSSVLDLAKYLKMYIERDE----SIVSKEYIEKMETSYIKVPWEIFGGEGYGYGL-----IIYPNFLGEKLVGHSGSVGMYTGYIGYI-PEKKIGVAVLENSSGYPPSYIAMYALALLLGKNPEKELPFIYRERILKKVEGRYMGYKGTIKFEVKVDGDVVYLRALGRAFTYTIPLFPEVLEEDFIKCYTLSNGRKMYAEFYIKDNKVDLIFERYRLIKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122887 for 2820 contacts (-43.6/contact) +
2D Compatibility (PS) -37249 + (NN) -11917 + (LL) 5752
1D Compatibility (HY) -22400 + (ID) 3500
Total energy: -192201.0 ( -68.16 by residue)
QMean score : 0.416
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