Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQLTNACNLSCSFCYASSG------KPYPEELSSEQWILVMQKLAAHGVADIT--LTGGEAKLIKGFKELVVVASSLFTNV-NVFSNGLNWRDEEVELLS----HLGNVSV---QISIDGMDNTHDQLRGR------KGGFKESMNTIKKLSEANIPVIVAMTINESNADEVSDVVEQCANAGAFIFRAGKT-LSVGRATEGFKALD---IDFEEMVQIQLREARHKWGDRLNIIDWEHEESSFTTDFCTPGYLAWYIRADGYVTPCQLEDLPLGHILEDSMADIGSPARLLQLKCEAKNCKCIGKIELSEPDLPFQKEVKAGIQE |
| 4R33 Chain:A ((35-418)) | ------GDFVLPELEDVRAEAATV--DTRAVLALAEGEEPAE-----------SRAAVALALWEDRSIGTAELQAAAEARC-------GARRPRLHT------FVPLY----TTNYCDSECKMCSMRKGNHRLDRKFSGRKEITEQLEILYHHEGVRGVGFLTGEYEDKHTRLASAFRIGWAIRTALDLGFERVYFNIGSMEQDEIDVLGEWIGREDPVTMCVFQESYD--RETYRRFMGKTSVGVPKADFDRRVVSFDRWLDAGYRYVNPGVLVGLHDDLSAELVSLVAHGDHLRSRGATADLSVPRMRPAMKSRDTTRVGDDDYLRLMSVVAFTCPEQRLVLTTREPQEFQDVALGLA-----------GVISPGSPDVAPYRAGCEARNDEKSSQ---FLVADLRRPRHILGRIEASGTPVDHFVNPAGEASR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36685 for 2981 contacts (-12.3/contact) +
2D Compatibility (PS) -38307 + (NN) -11245 + (LL) 3988
1D Compatibility (HY) -10800 + (ID) 3400
Total energy: -96449.0 ( -32.35 by residue)
QMean score : ?
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