Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQDSMQFAAVESGLRFYQAYDQSLSLWPIESEAFYVSTRFGKTHIIASGP--KDAPSLILLHGGLFSSAMWYPNIAAWSSQFRTYAVDIIGDKNKSIPSAAMETRADFAEWMKDVFDSLGLETAHLAGLSLGGSHIVNFLLRAPERVERAVVISPAEAFISFHPDVYKYAAELT---GARGAESY-IKWITGDSYDLHPLLQRQIVAGVEWQDEQRSLKPTENGFPYVFTDQELKSIQVPVLLMFGEHEAMYHQQMAFERASVLVPGIQAEIVKNAGHLLSLEQPEYVNQRVLSFLCGGIK
2XUA Chain:A ((7-264))------------------------------------AAVNGTELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPKG-PYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPE-VWVPRAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKE-GYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQ-GRELAQAIAGARYVEL-DASHISNIERADAFTKTVVDFLTE---


General information:
TITO was launched using:
RESULT:

Template: 2XUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1562 -160127 -102.51 -635.42
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -102.51
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_2XUA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XUA-query.scw
PDB file : Tito_Scwrl_2XUA.pdb: