Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSVNLSYPIGEYKPRESISKEQKDKWIQVLEEVPAKLKQAVEVMTDSQLDTPYRDGGWTVRQVVHHLADSHMNSYIRFKLSLTEETPAIRP--YD--EK-AWS--ELKDSKTADPSGSLALLQELHGRWTALLRTLTDQQFKRGFYHPDTK--EIITLENALGL-YVWHSHHHIAHITELSRRMGWS
5CIV Chain:A ((16-183))-------------------EYTSKEELKKTIHAAYLLLDGEFEGIDDSQKDNRVPEVDRTPAEIIAYQLGWLHLVMGWDRDELAGKPVIMPAPGYKWNQLGGLYQSFYAAYADLSLTELRRLFRDTERQWLDWIDTLSEEDLFTQSVRKWTGDKPNWPMARWIHINSAAPFKTFRAKIRKWKKHQRQ-


General information:
TITO was launched using:
RESULT:

Template: 5CIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 604 -33943 -56.20 -214.83
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -56.20
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_5CIV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CIV-query.scw
PDB file : Tito_Scwrl_5CIV.pdb: