Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKELFVNLTILITFNYLFTHLFKERLVHKKDSISFQAVKGLACGLLGVILMVFGFTYQHSIIDLRNIPIMIAALYGGWVSTATALAMITAGRLLITMNTSALYSVIIICIAAIPSLIVSRRKKVQLKHAFYLLIITNSLISFSFYFLIDLHSYELHLYFWIISIAGGMLSLYIIDHETNAHLLFKQYKFQAHFDFLTGVYNRRKFEETTKALYQQAADTPHFQFALIYMDIDHFKTINDQYGHHEGDQVLKELGLRLKQTIRNTDPAARIGGEEFAVLLPNCSLDKAARIAERIRSTVSDAPIVLT-NGDELSVTISLGAAHYPNNTEQPGSLPILADQMLYKAKETGRNRVCFSEKKE
1W25 Chain:A ((285-454))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LELAVTDQLTGLHNRRYMTGQLDSLVKRATL-GGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAAH-


General information:
TITO was launched using:
RESULT:

Template: 1W25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 835 -99875 -119.61 -590.98
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -119.61
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_1W25.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W25-query.scw
PDB file : Tito_Scwrl_1W25.pdb: