Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLFE-ITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQID-PEQDVPYVLETIKLLVNE-QLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIEAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE-------NVPLIMFGVGASHLAGDWHDLPLDVVGLDWRLGIDEARSK-GITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYSQNKKMGQYS
1URO Chain:A ((10-366))-GFPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQDFFST-CRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD-FGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQ----


General information:
TITO was launched using:
RESULT:

Template: 1URO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2005 -239417 -119.41 -691.96
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -119.41
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_1URO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1URO-query.scw
PDB file : Tito_Scwrl_1URO.pdb: