Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHTVTQTSLYGKDLLTLKDLSEEDINALLAEAGELKQNKI----QPIFHGKTLAMIFEKSSTRTRVSFEAGMAQLGGSALFLSQKDLQLGRGETVADTAKVLSGYVDAIMIRTFEHEKVEELAKEADIPVINGLTDKYHPCQALADLLTIKE-IKGK-LKGVKVAYIGDG-NNVAHSLMIGCAKMGCDISIASPKGYEVLDEAAEAAKTYALQSGSSVTLTDDPIEAVKDADVIYSDVFTSMGQEAEEQ-ERLAVFAPYQVNAALVSH-AKPDYTFLHCLPA-HREE----------------EVTAEIIDGPNSAVFQQAENRLHVQKALLKAILYKGESSKNC
4H31 Chain:B ((28-356))-------NLRNRNFLKLLDFSTKEIQFLIDLSADLKKAKYAGTEQKKLLGKNIALIFEKASTRTRCAFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRMYDGIQYRGFGQAIVEELGAFAGVPVWNGLTDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCLPAFHNDETTIGKQVADKFGMKGLEVTEEVFESEHSIVFDEAENRMHTIKAVMVATL---------


General information:
TITO was launched using:
RESULT:

Template: 4H31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1789 -174851 -97.74 -577.06
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -97.74
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_4H31.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H31-query.scw
PDB file : Tito_Scwrl_4H31.pdb: