Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDPLDILTNIDDVLPYYQAIFSAEEQKVVGYEVLGRILAD-SEIQSLGPFFLDAGIPEEYKLEVDNRIIRQALDRFL-EADSDLLIFMNQDANLLMLDHGESFLELLKEYEA-KGIELHRFVLEITEHNFEGDIEQLYHMLAYYRTYGIKIAVDNIGKESSNLDRIALLSPDLLKIDLQALKVSQPSPSYEHVLYSISLLARKIGAALLYEDIEANFQLQYAWRNGGRYFQGYYLVSPSETFLERDVLKQRLKTEFHQFITHEKKKLETVYEHSEQFYKRVHQAVTSLRKNNLSSDDDFIKKLAEELTDCSFRIYMCDEEGDQLTGNVFKQDGEWIYQPEYAEKNWSWRPYFLENIMRMRNLRKGFFSDLYSDLETGEMIRTFSYPMDDQMYLFIDLPYSYLYEQDGLI
3HV8 Chain:A ((22-260))--AILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAK-EAGLAEKIDRWVILNSIKLLAEH---QTKLFVHLSSASLQD---PGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQV-ENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMD----------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3HV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1155 -157328 -136.21 -681.07
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -136.21
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.408

(partial model without unconserved sides chains):
PDB file : Tito_3HV8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HV8-query.scw
PDB file : Tito_Scwrl_3HV8.pdb: