Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLKLRLTHLWYKLLMKLGLKSDEVYYIGGSEALPPPLSKDEEQVLLMKLPNGDQAARAILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVNTFNPEKKIKLATYASRCIENEILMYLRRNNKIRSEV----------------------------------------------------SFDEPLNIDWDGNELLLSDVLGT-DDDIITKDIEANVDKKLLKKALEQLNEREKQIMELRFGLVGEEEKTQKDVADMMGISQSYISRLEKRIIKRLRKEFNKMV
5IPL Chain:F ((54-320))--------------------VLDATQLYLGEIGYSP-LLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGD---SEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQ-


General information:
TITO was launched using:
RESULT:

Template: 5IPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 635 -63805 -100.48 -298.15
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain F : 0.69

3D Compatibility (PKB) : -100.48
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_5IPL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IPL-query.scw
PDB file : Tito_Scwrl_5IPL.pdb: