Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTMQIKIKYLDETQTRISKIEQGDWIDLRAAEDVTIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDTEIKKGDRICQFRIMKKMPAVELVEVEHLGNEDRGGLGSTGTK
2Y1T Chain:E ((1-128))--MQIKIKYLDETQTRINKM-QGDWIDLRAAEDVAIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDTKIKKGDRICQFRIMKKMPAVDLIEVDRL--------------


General information:
TITO was launched using:
RESULT:

Template: 2Y1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 535 -69567 -130.03 -547.77
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain E : 0.95

3D Compatibility (PKB) : -130.03
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.95
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_2Y1T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y1T-query.scw
PDB file : Tito_Scwrl_2Y1T.pdb: